Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903438.1_cds_XP_016453516.1_47634
CDS Infomation

[gene=LOC107777868] [db_xref=GeneID:107777868] [protein=pentatricopeptide repeat-containing protein At3g29290-like] [protein_id=XP_016453516.1] [location=join(160380..160385,160628..160819,163378..163506,163994..165412,166046..166252)] [gbkey=CDS]
Sequence

ATGCAGGTGTTAGACGGGTTTCCATCGATTTGGGAACTTGGTGGGTGCTGTTCACTGAGA
GATCTAGTCATAGAGCCATTCAGTGGAAGGTCTCTTTCAGTGGACATGGAGTTGTTTCTC
CGCAAGCTTGTCACTTCCCAAACTTCTCTGACCAGCGCAGTCCAATGGAATCCTATTCCT
GTCCATTGTGTCTCAGTTTTTTTCTCAAGTGCAGTTCGAGTGTTTTACTTGCTCGGCCAA
CTGTCAATTCTGTTTTGTGTCTCCATTTGTGTGCTGAAGCAGTCAAGTTACCCTCGAGCT
ATATCTACTATACCTTCTAAATTTCAGCTAAAGTTACCATCAGTTTTATTTAGCTTCAAG
GAAGTGAATAACCTGTGCAGCATAGCTCTGAATGTCCCTTGTGAACTTGAATCCGTGTGT
GATAGAGAGAGTGAGGATTCTGATGTCCAAAACGGAAATTCAACCAATGATGCATATAAG
CTGGAATTGTCTCGTAAGGACTGTTTGACGAATTCAAATATTGGAAATCTTGATACAAAC
CAACCTTCAAGTTTTCTTGAAGAAACTAAAAATTCGGGTGAGGATGTGATTATGTACTTA
GAAGAGACGAATGAGGAGGTATTGTCAAAAAGGATCTTGAAGCTCAGCAGGCAAAATAAA
CCCAAAAGTGCATTGGCGATATACAAGTCGATGACTTTCTCAAGTCTTAAACCTGATTTA
CATGCATGTAATTCCCTTCTTTCAAGTCTCTTGAGGAATGGAATGCTTGATATTGCTTTA
AAAAACTTCAACTCCATGAAGGCTAGTGGGCTAACAACTGGCCACACTTATAGCTTGATT
CTGAAGGCAGTTGCTGATGCTCGGGGTTGTAATGCAGCAATGAACATGTTCAGTGAATTG
ATAAGCAGTAAGAATCTTAAAGAAAAAATTGACATTGTTGTATACAACACGATGATATCC
ATTTTTGCAAAAGCAAACAGCTGGTATCAGGCACAAAAGATCTGGAACATTTTGAAGGAT
AATGGTCAAGTTGGAACGATAGTCACTTACCGTCTACTAGTTTGCACGTTTGTTCGTTGT
GGTCAGAATGAATTAGCTATTGATGCATACAGTGAGTTGATTCGAAATGGATTGAGCCCA
GAAGGTGATACAATGCATGCTATTATTGGAGCATACTCTAGGGAGGGCAAGTATGATTCT
GCATTGAACGTCTTGCAATATATGTTGGACAACGAGCTGAAGCCAAATGAAAGAGCATGC
AACGCAGTGATCAACTCACTTGGAAAAGCTGGCAAAGTCAAACTTTCCTTTGAAGTTTAT
GAGTTGATGAAATCACTAGGTCATGCACCTGACGCGTACACATGGAATTCATTGCTCAAT
GCCTTAAACAGGGCAAATCGATATTCAGAGGCACTTCAGCTCTTTGAGAGAATCAGGAAT
CTTCAAAGTGTCATTTTGAATGTGCATATATACAATACTATTTTGACATCGTGCCACAGA
CTTGGGTTGTGGGACAAAGCTATACAGATACTGTGGCAGATGGAGGCTTCCGAAATTCCG
GTTTCAACTGCATCCTATAATCAAGTAATTGGAGCTTGTGAGGTAGCGAGAAGGCCCAAG
GTTGCGTTACAAGTTTATTACCGCATGGTTCGCAAAAAACATTCTCCTGACATATTTACT
CTATTGTCGTTGATGAGAGTTTGCATCTGGGGTTCTCTCTGGAATGAAGCAGTGGAAATA
CTAAAACTTTCTGCACCAAATGGATCACTTTACAATGCTGCTATTCAAGGGATGTTTTTA
ACAGGGAAGATTGATTTGGCTAAGAAGCTGTACACGGAAATGCGTGAGAGAGGCCTTCAA
CCCGATGGCAAGACACGGGCTATGATGCTGCAAAACTTACCAAGGCGTTCCATGAGAAAT
AGAAGGCGAAATGTGCAAAACTATAAATTTTGA

Peptide Sequence

PEP ID

XP_016453516.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Nicotiana tabacum]
Sequence

MQVLDGFPSIWELGGCCSLRDLVIEPFSGRSLSVDMELFLRKLVTSQTSLTSAVQWNPIP
VHCVSVFFSSAVRVFYLLGQLSILFCVSICVLKQSSYPRAISTIPSKFQLKLPSVLFSFK
EVNNLCSIALNVPCELESVCDRESEDSDVQNGNSTNDAYKLELSRKDCLTNSNIGNLDTN
QPSSFLEETKNSGEDVIMYLEETNEEVLSKRILKLSRQNKPKSALAIYKSMTFSSLKPDL
HACNSLLSSLLRNGMLDIALKNFNSMKASGLTTGHTYSLILKAVADARGCNAAMNMFSEL
ISSKNLKEKIDIVVYNTMISIFAKANSWYQAQKIWNILKDNGQVGTIVTYRLLVCTFVRC
GQNELAIDAYSELIRNGLSPEGDTMHAIIGAYSREGKYDSALNVLQYMLDNELKPNERAC
NAVINSLGKAGKVKLSFEVYELMKSLGHAPDAYTWNSLLNALNRANRYSEALQLFERIRN
LQSVILNVHIYNTILTSCHRLGLWDKAIQILWQMEASEIPVSTASYNQVIGACEVARRPK
VALQVYYRMVRKKHSPDIFTLLSLMRVCIWGSLWNEAVEILKLSAPNGSLYNAAIQGMFL
TGKIDLAKKLYTEMRERGLQPDGKTRAMMLQNLPRRSMRNRRRNVQNYKF

Transcript Sequence

Gene sequence data has not been registered.